PlantTFDB
Plant Transcription Factor Database
v4.0
Previous version: v3.0
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID EPS63404.1
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Lentibulariaceae; Genlisea
Family bHLH
Protein Properties Length: 88aa    MW: 10234.5 Da    PI: 4.9675
Description bHLH family protein
Gene Model
Gene Model ID Type Source Coding Sequence
EPS63404.1genomeLSMUView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1HLH21.34.8e-07348350
                HHHHHHHHHHHHHHHHHHHHHHCTSCCC...TTS-.STCHHHHHHHHHH CS
         HLH  3 rahnerErrRRdriNsafeeLrellPkaskapskK.lsKaeiLekAveY 50
                +++ erE+r RdriN+ f +L   l      +++    Ka+iL+++++ 
  EPS63404.1  3 QNKAEREKRKRDRINELFINLGNSLDFK---QHQTvQGKASILRETIRV 48
                7899**********************97...55555**********985 PP

Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PROSITE profilePS5088810.232152IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
PfamPF000102.0E-5348IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
Gene3DG3DSA:4.10.280.101.1E-7473IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
SuperFamilySSF474592.88E-10476IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0010106Biological Processcellular response to iron ion starvation
GO:0055072Biological Processiron ion homeostasis
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
GO:0046983Molecular Functionprotein dimerization activity
Sequence ? help Back to Top
Protein Sequence    Length: 88 aa     Download sequence    Send to blast
RAQNKAEREK RKRDRINELF INLGNSLDFK QHQTVQGKAS ILRETIRVLV EQRALIDGLE  60
KENATLVSES NYVEAERNEL LDEIAELE
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_012841332.12e-23PREDICTED: transcription factor bHLH47-like
TrEMBLS8C9261e-55S8C926_9LAMI; Uncharacterized protein (Fragment)
STRINGGLYMA17G10740.13e-17(Glycine max)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
AsteridsOGEA43071934
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G47640.32e-18bHLH family protein
Publications ? help Back to Top
  1. Leushkin EV, et al.
    The miniature genome of a carnivorous plant Genlisea aurea contains a low number of genes and short non-coding sequences.
    BMC Genomics, 2013. 14: p. 476
    [PMID:23855885]